Having my user folders (Downloads, Pictures, Videos, Documents) to my secondarey 2tb hard drive is causing my computer to lock up and the cpu usage spikes to 100% also a tracker-extraction procsess going on the uses a lot of CPU.
The system is semi usable after this happens but some apps frezze and won't open for example Nautilus. Trying to run it from the command line gives me and error about timeout reached